Category Archives: IBDP Biology

Essential Biology 03 – Chemistry of Life uploaded

Part 3 of the revision guide for 2009 session IB Diploma Biology is here:

essential-biology-03-chemistry-of-life.doc

To the right of this page there are also new updates specifically aimed at IBDP Bio – separate pages for each topic in the syllabus. I’ll try to get these as complete as possible as soon as possible, but things might be a bit quiet round here in the run-up to the exams.

If you dowload the document, let me know how you get on.

Hormonal Control – linklist

Donwload the powerpoint here: hormonal_control.ppt

Here’s a good simple overview of steroids and peptides – Wisconsin Online

Old school overview of the endocrine system:

Mode of action of steroid hormones:

Clear explanation from McGraw Hill

Mode of action of peptide steroids:

Short video, but clear – UC Davis


Mode of action of thyroxine:

Another one from McGraw Hill

Negative feedback and thyroxin secretion:

Control of the pituitary – Leif Saul (Biology in Motion – very good)

Control of ADH Secretion:

Too simple, but good overview – BBC GSCE Bitesize

Focus on the kidney (reviewing the effect of ADH) – BiologyMad

Other useful links:

North Harris College linklist

Photosynthesis Linklist

Here’s a bit of silliness to begin:

And now for some ‘proper’ stuff:

(Download the version with animations and notes here: photosynthesis.ppt)

Step-through – Garrett and Grisham Biochemistry

John Kyrk again – very detailed

Simple, not entirely relevant – University of Aberdeen

Old-school animations, useful explanations – Teachnet

Light dependent reaction:

Nice and simple – St Olaf college

Another simple animation – on the webpage of National Louis University

Light Independent Reactions:

Calvin cycle step-through – National Louis University

Nice interactive Calvin cycle – Smith College

Some more general videos and overviews after the jump…

Read the rest of this entry

Monoclonal Antibodies

Here’s a walk-through from Sumanas Multimedia. They also have a fewother animations and applets on useful topics, including synaptic transmisson, statistics and HIV.

Cell Respiration – linklist

respiration1.pngHere’s a good one for an opener: no narration, just an action-packed graphic.

It comes from Dr. Meyer at Queensborough Community College.

Here’s a cracking step-through animation  – from John Burrell at Patana

Slideshare.net has collections of slideshows that can be viewed online:

Download the editable version here: cell_respiration_hl.ppt

Here’s another:

OK, here are some more animations:

Respiration is not breathing! – Tim and Moby (Brainpop)

Good tutorial with questions – University of Wisconsin

Simple overview – Herriot Watt

Flash Overview – UC Davis biosciences

Windows Media overview (very flashy, above HL) – Virtual Cell Animation Collection

Stage-specific animations after the jump (glycolysis, Kreb’s cycle and ETC, oxidative phosphorylation)

Read the rest of this entry

150 years since ‘On the Origin of Species’

Darwin’s theory of natural selection was finally published (and sold-out) in November 1859. The idea had been in his head, and a talking point of others, for years before. We’re still talking about it today.

Here’s a clip from a BBC documentary called Legacy about the impact of Darwin’s ideas:

The Guardian newspaper has a great page devoted to Darwin, including key excerpts from ‘On the Origin of Species…‘ and an article by Richard Dawkins.

You can download the full text of the first edition in pdf format from the University of New South Wales, or read it online at Talk Origins.

Neurons and Synapses: linklist

Here’s a jazzy introduction from Discovery Channel, with a soundtrack inspired by Tubular Bells:

And now for the serious animations.

Neurons and Action Potentials:

Excellent Flash from  Children’s Hosital Boston

Good introduction from Harvard

Excellent comprehensive tutorial (Harvard Outreach)

Another good AP tutorial (can’t be saved) (Jordan Kerr University)

Generating Action Potential (MRothery, Watford Girls’ Grammar)

Comparing continuous and saltatory transmission (Matthews/Neurobiology)

Propagating an AP (McGraw Hill) (More from this source)

Synaptic Transmission:

Nice clear intro (McGraw Hill)

Another clear one (though missing the post-transmission ‘cleanup’) (BishopStopford)

Some Chemsketches of neurotransmitters (Harvey Project)

Neuromuscular Junction:

Neuromuscular junction step-through (Sinauer Associates)

Simple line-drawing animation (Harvey Project)

Muscle Contraction:

Nice animation of sliding filaments (Matthews/Neurobiology)

A good interactive diagram (Thomson/Brooks/Cole)

Neurotransmitters and Drugs:

Excellent, accessible overview from Jellinek, a Dutch drug education website

Good powerpoint from HHMI

Excellent overview of effects of drugs (Harvard)

Amphetamines, Cocaine, Nicotine as excitatory psychoactives (McGill ‘The Brain’)

Benzodiazepines, Cannabis, Alcohol as inhibitory psychoactives (McGill ‘The Brain’)

Parkinson’s Disease:

Short Introduction (from UPenn/ADAM)

Simple interactive – effects of lesions on inhibitory or excitatory ganglia (San Diego State College of Science)

Sample Questions: have a go at these NeuroBioHL_Qs

Gene Almanac – a resource of good animations and simulations

From the Dolan Learning Centre, this collection of animations and simulations can be downloaded easily for PC and MAC.

Clicking the image on the left should bring you directly to an animation about the polymerase chain reaction.

Imaging Technology Group’s Virtual Microscope – Amazing free software

This is an unbelievable free, open-source piece of software. It basically emulates a scanning electron microscope and allows you all kinds of fuctionality, including: wide range of magnifications of super-high quality images; mass spec analysis with false colouring of different elements present; control over colour, brightness and image position; a very nifty measurement/line tool that is just perfect for the the IB Cells statements on magnifications.

The download is 128MB for the package including three images ready to mount. When opened, you can download many more images (around 25-30MB each – huge and great quality).

It’s brilliant – stop reading this and go play with it.

Well, if you’re still reading…

Their excellent website also includes a series of animations on the basics of microscopy, videos on preparing mounts and even a section on careers in microscopy.

Social Behaviour

Attenborough and the eusocial naked mole rat. Good to see him get stuck in with a shovel.

Here’s a clip of chimpanzees grooming from www.arkive.org:

I couldn’t find a good clip of ant social behaviour that explained colony structure. Instead, here’s Vicky Pollard doing her thing as an example of anti-social behaviour:

“Where’s the baby?”

“Swapped it for a westlife CD.”

“How could you do that?”

“I know, they’re rubbish!”